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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015805967.1_cds_XP_016494159.1_8597
CDS Infomation

[gene=LOC107813402] [db_xref=GeneID:107813402] [protein=probable NOT transcription complex subunit VIP2 isoform X2] [frame=3] [partial=5'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016494159.1] [location=complement(join(1631..1690,1771..1915,2110..2151,2236..2288,2369..2791,3563..3649,3761..3849,4491..4574,4664..>4873))] [gbkey=CDS]
Sequence

TCTCCGCAGGTAATGTCTATGTTTGGTAATTCATATCCTCCTGCTGGTGGTCCACTATCT
CAGAACCATATCCAAGCAGTCGGCAACCTTAATTCTATGGGAATGCTGAATGATCTGAAT
TCAAATGATGGGTCTCCATTTGATATAAACGATTTCCCTCAGCTAAGCAGCCGACCTAGT
TCTGCTGGAGGGCCTCAAGGACAATTGGGTTCACTGCGAAAACAAATTGTTCAACAAAAT
CAGGAATTCAGCATTCAAAATGAAGATTTCCCAGCCTTGCCTGGATTTAAAGGTGGCAAT
GCTGATTATGGTATGGATCTACACCAGAAAGAACAACTCCATGATAATACTCTTTCTATG
ATGCAGCAGCAGCAGTTCTCTATGGGCAGATCTGGTGGCTTTAACTTGGGAGGGACATAC
TCATCACTTCGCACACAGCAGCAACAGCAACAGCAACATGCCCCATCGTCTGGTGGACCT
CCTGGTATCGGGTTACGACCTCTTAATTCTCCAAGTACTGTTTCTGGTATTGGCTCATAC
GATCAGCTTATCCAGCAGTATCAACAACATCAGAGTCAATCCCAATTTCGACTGCAGCAA
ATGTCTGCTTTAGGTCAGCCGTACAGGGATCAGGGCATGAAATCCATGCAGGCCCAAGCT
ACCCCTGACCCTTTTGGTATGCTTGGTTTACTAAGTGTAATAAGGATGAGCGATCCGGAT
CTGACTTCTCTTGCACTTGGAATTGATCTAACTACTCTTGGATTGAATTTGAACTCTGCC
GAAAATTTACACAAGGCATTTGGTTCCCCATGGTCTGATGAGCCTGCCAAGGGTGATCCA
GAATTTACTGTACCGCAATGTTATTATGCCAAGCAACCACCTCCTCTAAATCAAGCATAC
TTCTCCAAGTTTCAGTTAGACACTTTGTTTTACATTTTCTACAGCATGCCAAAGGATGAA
GCCCAATTATATGCTGCTAATGAATTGTATAATCGGGGCTGGTTTTACCACAGAGAACAT
CGATTATGGTTTATGAGGGTCGCCAACATGGAGCCTCTTGTCAAGACCAACGCCTATGAG
AGAGGATCTTATATATGTTTTGATCCAAACACATGGGAAACAATCCGCAAGGATAATTTT
GTGCTCCACTATGAGATGTTGGAAAAAAGACCTCTTCTACCTCAGCACTAA

Peptide Sequence

PEP ID

XP_016494159.1
PEP Infomation

PREDICTED: probable NOT transcription complex subunit VIP2 isoform X2 [Nicotiana tabacum]
Sequence

MSGLLNSSLNGSASNLPDNTGRSFPSSFSPQSGAPSPLYHHSGSIQGLHNIHGSFNVPNM
HGALGSRNTAINNVPSSGVQQSGNNLSGGRFVPNNLPTALSQISQGNSHAHSGMTSRGGM
SVVGNPGYSSNTNGVGGSIPGILPTSAAIGNRSSVPGLGVSPILGNAGPRMTNSVGNIVG
GGNIGRSISSGAGLSVPGLASRLNMNTNSGSGNLNVQGSNRLMSGVLQQASPQVMSMFGN
SYPPAGGPLSQNHIQAVGNLNSMGMLNDLNSNDGSPFDINDFPQLSSRPSSAGGPQGQLG
SLRKQIVQQNQEFSIQNEDFPALPGFKGGNADYGMDLHQKEQLHDNTLSMMQQQQFSMGR
SGGFNLGGTYSSLRTQQQQQQQHAPSSGGPPGIGLRPLNSPSTVSGIGSYDQLIQQYQQH
QSQSQFRLQQMSALGQPYRDQGMKSMQAQATPDPFGMLGLLSVIRMSDPDLTSLALGIDL
TTLGLNLNSAENLHKAFGSPWSDEPAKGDPEFTVPQCYYAKQPPPLNQAYFSKFQLDTLF
YIFYSMPKDEAQLYAANELYNRGWFYHREHRLWFMRVANMEPLVKTNAYERGSYICFDPN
TWETIRKDNFVLHYEMLEKRPLLPQH

Transcript Sequence

Gene sequence data has not been registered.